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What's Shaped Like a Pear and Has Two Genomes? Check The Pond.
Researchers sequence the macronuclear genome of Tetrahymena thermophila, a model eukaryote
Surf's Up — And One Coastal Microbe Has Adapted
With new cyanobacteria genome, scientists find life really does differ at the coast
Comparative sequence analysis of S. pneumoniae TIGR 4 and a set of diverse S. pneumoniae strains.
MultiExperiment Viewer (MeV) 4.0 with Linear Expression Map (LEM) Module Released
Proteomic analysis of cell envelope-associated proteins in a vancomcyin intermediate resistant Staphylococcus aureus (VISA) strain
Comparative proteomic analysis of Staphylococcus aureus strains of the VISA phenotype with differing resistance to vancomycin
Surprising Symbiosis: Glassy-Winged Sharpshooter Eats With Friends
Like a celebrity living on mineral water, the glassy-wingedsharpshooter consumes only the dilute sap of woody plants — including grapevinesin California,which is feverishly working to prevent the insect's flight into prizedvineyards. Now, in a surprising study published in the June 6 issue of PublicLibrary of Science Biology (PLoS Biology), researchers at The Institute forGenomic Research (TIGR), the University of Arizona, and their colleagueshave discovered that the sharpshooter's deprivation diet is sneakilysupplemented by not one, but two co-dependent bacteria living inside its cells.
Gut Reaction: Researchers Define The Colon's Genome
For the first time, scientists describe the busy microbial world inside
Comparative sequence analysis of B. anthracis Ames Ancestor and a set of diverse B. anthracis strains.
Leading Department of Energy Genome Scientist to Direct Joint Marine Microbial Metagenomics Cyberinfrastructure Initiative
Dr. Paul Gilna Will Lead Moore Foundation-Funded Project Linking UC San Diego and Venter Institute
Government of Victoria, Australia and Venter Institute to Survey and Sequence Microbes in Soil and Bovine Digestive System
Environmental genomics approach expected to reveal biological diversity in lesser known ecosystems
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Biowalk of Fame
There is a new “Biowalk of Fame” in Maryland, and our own Craig Venter was one of the first honorees receiving a plaque, which is there for all to see as you stroll through lovely Silver Spring. Other honorees include Dr. Martin Rodbell and Ben Carson. The event to honor the...
Moving dirt at JCVI La Jolla
After celebrating the ground breaking of JCVI La Jolla, McCarthy Building Companies immediately got to work preparing the land for construction. First the crew set up a work area to house the staff and equipment needed for the project. The site was cleared and stabilized for construction...
Scientist Spotlight: Meet David Wentworth
During the height of the H1N1 Flu pandemic, David Wentworth was running a microbial genetics laboratory at the Wadsworth Center, New York State Department of Health (NYSDOH) where he was instrumental in developing a method to amplify influenza genomes regardless of strain using “universal...
2012 JCVI Internship Program Is Now Accepting New Applications
Wow! Another year has gone by. Its hard to think it is November - almost December with the warm weather we have been enjoying. However it did not start that way. The 2012 JCVI Internship Program is open to accept spring and summer applications. The application process...
JCVI La Jolla Breaks Ground
It is official! On Tuesday, September 20th JCVI officially broke ground on a new La Jolla, California sustainable lab, to be located directly on the campus of the University of California, San Diego. Craig Venter, JCVI Founder and President along with UCSD Chancellor Marye Anne Fox; Vice...
Evaluating Strain-level Variation of Key Acidogenic Species in Dental Plaque Biofilms
The characterization of the dental plaque microbiome, using traditional 16S rDNA profiling strategies, illustrates both the strengths and the limitations of this method. The central limitation of the 16S rDNA methodology is the inability to decipher strain-level variation within a...
Cataloguing the Gene Expression Patterns of Dental Plaque Biofilms: A Reference Dental Plaque Transcriptome
The RNA-Seq method has been widely adopted as an alternative to the use of DNA microarrays. In most contexts, the RNA-Seq method is implemented when a single reference organism is being studied. Our project endeavored to establish working methods to enable the generation of cDNA libraries that...
Surrogate Methods for Profiling Species of the Oral and Gut Microbiome
We engaged in an effort focused on alleviating a substantial barrier facing the human microbiome research community. While powerful, the 16S rDNA gene is insufficiently divergent to allow discrimination of many species and essentially no strains present within communities. The increasing costs...
The Mobile Lab Is Going to Sunny San Diego
Late one evening in January 2006, the mobile lab pulled into the parking lot at 9704 Medical Center Drive. It was such an exciting evening! Within a few days, we had all the lab supplies on it and began visiting students. The first school in the Washington Area was Patapsco Middle School in...
The Hill School: Day 2
The day started early Tuesday with first period. Thirty eager students arrived on the bus to determine the results of the amplification of the DNA they extracted the day before. The PCR ran overnight, copying part of a conserved gene in plants, RuBisCo, that can be used to...
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Can CRISPR help stop African Swine Fever?
Gene editing could create a successful vaccine to protect against the viral disease that has killed close to 2 million pigs globally since 2021.
Getting Under the Skin
Amid an insulin crisis, one project aims to engineer microscopic insulin pumps out of a skin bacterium.
Planet Microbe
There are more organisms in the sea, a vital producer of oxygen on Earth, than planets and stars in the universe.
The Next Climate Change Calamity?: We’re Ruining the Microbiome, According to Human-Genome-Pioneer Craig Venter
In a new book (coauthored with Venter), a Vanity Fair contributor presents the oceanic evidence that human activity is altering the fabric of life on a microscopic scale.
Lessons from the Minimal Cell
“Despite reducing the sequence space of possible trajectories, we conclude that streamlining does not constrain fitness evolution and diversification of populations over time. Genome minimization may even create opportunities for evolutionary exploitation of essential genes, which are commonly observed to evolve more slowly.”
Even Synthetic Life Forms With a Tiny Genome Can Evolve
By watching “minimal” cells regain the fitness they lost, researchers are testing whether a genome can be too simple to evolve.
Privacy concerns sparked by human DNA accidentally collected in studies of other species
Two research teams warn that human genomic “bycatch” can reveal private information
Scientists Unveil a More Diverse Human Genome
The “pangenome,” which collated genetic sequences from 47 people of diverse ethnic backgrounds, could greatly expand the reach of personalized medicine.
First human ‘pangenome’ aims to catalogue genetic diversity
Researchers release draft results from an ongoing effort to capture the entirety of human genetic variation.
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