Publications

Eukaryotic cell. 2015-12-01; 14.12: 1240-52.
Depletion of UBC9 Causes Nuclear Defects during the Vegetative and Sexual Life Cycles in Tetrahymena thermophila
Yang Q, Nasir AM, Coyne RS, Forney JD
PMID: 26453653
Environmental microbiology. 2015-12-01; 17.12: 5100-8.
Closing the gaps on the viral photosystem-I psaDCAB gene organization
Roitman S, Flores-Uribe J, Philosof A, Knowles B, Rohwer F, Ignacio-Espinoza JC, Sullivan MB, Cornejo-Castillo FM, Sánchez P, Acinas SG, Dupont CL, Béjà O
PMID: 26310718
Proceedings of the National Academy of Sciences of the United States of America. 2015-11-24; 112.47: 14658-63.
Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load
McLaren PJ, Coulonges C, Bartha I, Lenz TL, Deutsch AJ, Bashirova A, Buchbinder S, Carrington MN, Cossarizza A, Dalmau J, De Luca A, Goedert JJ, Gurdasani D, Haas DW, Herbeck JT, Johnson EO, Kirk GD, Lambotte O, Luo M, Mallal S, van Manen D, Martinez-Picado J, Meyer L, Miro JM, Mullins JI, Obel N, Poli G, Sandhu MS, Schuitemaker H, Shea PR, Theodorou I, Walker BD, Weintrob AC, Winkler CA, Wolinsky SM, Raychaudhuri S, Goldstein DB, Telenti A, de Bakker PI, Zagury JF, Fellay J
PMID: 26553974
Microbiome. 2015-11-16; 3.53.
Variable responses of human and non-human primate gut microbiomes to a Western diet
Amato KR, Yeoman CJ, Cerda G, Schmitt CA, Cramer JD, Miller ME, Gomez A, Turner TR, Wilson BA, Stumpf RM, Nelson KE, White BA, Knight R, Leigh SR
PMID: 26568112
Proceedings of the National Academy of Sciences of the United States of America. 2015-11-10; 112.45: 14024-9.
Library preparation methodology can influence genomic and functional predictions in human microbiome research
Jones MB, Highlander SK, Anderson EL, Li W, Dayrit M, Klitgord N, Fabani MM, Seguritan V, Green J, Pride DT, Yooseph S, Biggs W, Nelson KE, Venter JC
PMID: 26512100
G3 (Bethesda, Md.). 2015-11-06; 6.1: 107-20.
The Genomic Signature of Population Reconnection Following Isolation: From Theory to HIV
Alcala N, Jensen JD, Telenti A, Vuilleumier S
PMID: 26546308
The journals of gerontology. Series A, Biological sciences and medical sciences. 2015-11-01; 70.11: 1418-24.
Mitochondrial DNA Heteroplasmy Associations With Neurosensory and Mobility Function in Elderly Adults
Tranah GJ, Yaffe K, Katzman SM, Lam ET, Pawlikowska L, Kwok PY, Schork NJ, Manini TM, Kritchevsky S, Thomas F, Newman AB, Harris TB, Coleman AL, Gorin MB, Helzner EP, Rowbotham MC, Browner WS, Cummings SR, Health, Aging and Body Composition Study
PMID: 26328603
Bioresource technology. 2015-11-01; 195.254-64.
Functional and taxonomic dynamics of an electricity-consuming methane-producing microbial community
Bretschger O, Carpenter K, Phan T, Suzuki S, Ishii S, Grossi-Soyster E, Flynn M, Hogan J
PMID: 26178785
Science (New York, N.Y.). 2015-10-30; 350.6260: 507-8.
MICROBIOME. A unified initiative to harness Earth's microbiomes
Alivisatos AP, Alivisatos AP, Blaser MJ, Balskus EP, Biteen JS, Brodie EL, Chun M, Blaser MJ, Dangl JL, Brodie EL, Donohue TJ, Browning ND, Dorrestein PC, Cardon ZG, Cavanaugh CM, Gilbert JA, Green JL, Chun M, Jansson JK, Cliffel DE, Colwell RR, Knight R, Dangl JL, Maxon ME, McFall-Ngai MJ, Donohue TJ, Miller JF, Dorrestein PC, Pollard KS, Fraser SE, Ruby EG, Friesen ML, Gilbert JA, Taha SA, Gilbert SF, Unified Microbiome Initiative Consortium, Green JL, Harwood CS, Henriksen JR, Highlander SK, Huang Y, Jansson JK, Johnson AT, Kasper DL, Knight R, Kujawinski EB, Martin CL, Maxon ME, McFall-Ngai MJ, Miller JF, Moran MA, Nelson KE, Orphan VJ, Ozcan A, Paša-Tolić L, Pollard KS, Regev A, Rubin EM, Ruby EG, Segre JA, Silver PA, Taha SA, Vivanco JM, Weinstock GM, Weiss PS, Yang P
PMID: 26511287
Standards in genomic sciences. 2015-10-29; 10.89.
High quality draft genomes of the Mycoplasma mycoides subsp. mycoides challenge strains Afadé and B237
Fischer A, Santana-Cruz I, Hegerman J, Gourlé H, Schieck E, Lambert M, Nadendla S, Wesonga H, Miller RA, Vashee S, Weber J, Meens J, Frey J, Jores J
PMID: 26516405

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