Publications

Cell metabolism. 2017-05-02; 25.5: 1054-1062.e5.
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE
PMID: 28467925
Journal of bacteriology. 2017-05-01; 199.9:
Assessment of Insertion Sequence Mobilization as an Adaptive Response to Oxidative Stress in Acinetobacter baumannii Using IS-seq
Wright MS, Mountain S, Beeri K, Adams MD
PMID: 28193905
Genome research. 2017-05-01; 27.5: 722-736.
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM
PMID: 28298431
Oncotarget. 2017-04-25; 8.17: 27786-27799.
Analysis of variability in high throughput screening data: applications to melanoma cell lines and drug responses
Ding KF, Finlay D, Yin H, Hendricks WPD, Sereduk C, Kiefer J, Sekulic A, LoRusso PM, Vuori K, Trent JM, Schork NJ
PMID: 28212541
Nucleic acids research. 2017-04-20; 45.7: e50.
Efficient size-independent chromosome delivery from yeast to cultured cell lines
Brown DM, Chan YA, Desai PJ, Grzesik P, Oldfield LM, Vashee S, Way JC, Silver PA, Glass JI
PMID: 27980064
BMC genomics. 2017-04-13; 18.1: 296.
Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
Greenwald WW, Klitgord N, Seguritan V, Yooseph S, Venter JC, Garner C, Nelson KE, Li W
PMID: 28407798
Advances in microbial physiology. 2017-04-03; 70.261-313.
Metal Resistance and Its Association With Antibiotic Resistance
Pal C, Asiani K, Arya S, Rensing C, Stekel DJ, Larsson DGJ, Hobman JL
PMID: 28528649
Cancer prevention research (Philadelphia, Pa.). 2017-04-01; 10.4: 226-234.
The Human Microbiome and Cancer
Rajagopala SV, Vashee S, Oldfield LM, Suzuki Y, Venter JC, Telenti A, Nelson KE
PMID: 28096237
The Journal of general virology. 2017-04-01; 98.4: 577-584.
Pathogenicity of modified bat influenza virus with different M genes and its reassortment potential with swine influenza A virus
Yang J, Lee J, Ma J, Lang Y, Nietfeld J, Li Y, Duff M, Li Y, Yang Y, Liu H, Zhou B, Wentworth DE, Richt JA, Li Z, Ma W
PMID: 28100299
Microbial ecology. 2017-04-01; 73.3: 658-667.
Reducing the Bottleneck in Discovery of Novel Antibiotics
Jones MB, Nierman WC, Shan Y, Frank BC, Spoering A, Ling L, Peoples A, Zullo A, Lewis K, Nelson KE
PMID: 27896376

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