Publications

BMC bioinformatics. 2005-01-24; 6.16.
Efficient decoding algorithms for generalized hidden Markov model gene finders
Majoros WH, Pertea M, Delcher AL, Salzberg SL
PMID: 15667658
Oncogene. 2005-01-13; 24.3: 489-501.
Autocrine activation of an osteopontin-CD44-Rac pathway enhances invasion and transformation by H-RasV12
Teramoto H, Castellone MD, Malek RL, Letwin N, Frank B, Gutkind JS, Lee NH
PMID: 15516973
Science (New York, N.Y.). 2005-01-07; 307.5706: 82-6.
A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
PMID: 15637271
Science (New York, N.Y.). 2005-01-07; 307.5706: 105-8.
Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes
Seshadri R, Adrian L, Fouts DE, Eisen JA, Phillippy AM, Methe BA, Ward NL, Nelson WC, Deboy RT, Khouri HM, Kolonay JF, Dodson RJ, Daugherty SC, Brinkac LM, Sullivan SA, Madupu R, Nelson KE, Kang KH, Impraim M, Tran K, Robinson JM, Forberger HA, Fraser CM, Zinder SH, Heidelberg JF
PMID: 15637277
BMC bioinformatics. 2005-01-05; 6.2.
Visualization of comparative genomic analyses by BLAST score ratio
Rasko DA, Myers GS, Ravel J
PMID: 15634352
PLoS biology. 2005-01-04; 3.1: e15.
Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species
Fouts DE, Mongodin EF, Mandrell RE, Miller WG, Rasko DA, Ravel J, Brinkac LM, Deboy RT, Parker CT, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Sullivan SA, Shetty JU, Ayodeji MA, Shvartsbeyn A, Schatz MC, Badger JH, Fraser CM, Nelson KE
PMID: 15660156
Critical reviews in microbiology. 2005-01-01; 31.4: 233-54.
Genetic analysis and attribution of microbial forensics evidence
Budowle B, Johnson MD, Fraser CM, Leighton TJ, Murch RS, Chakraborty R
PMID: 16417203
Genome biology. 2005-01-01; 6.1: 341.
The first decade of microbial genomics: what have we learned and where are we going next?
Rasko DA, Mongodin EF
PMID: 16168094
Nucleic acids research. 2005-01-01; 33.Database issue: 6688-93.
The genetic map and comparative analysis with the physical map of Trypanosoma brucei
Macleod A, Tweedie A, McLellan S, Taylor S, Hall N, Berriman M, El-Sayed NM, Hope M, Turner CM, Tait A
PMID: 16314301
Current issues in molecular biology. 2005-01-01; 7.1: 23-37.
The genome of model malaria parasites, and comparative genomics
Carlton J, Silva J, Hall N
PMID: 15580778

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