Publications

Applied and environmental microbiology. 2005-05-01; 71.5: 2209-13.
Toward a system of microbial forensics: from sample collection to interpretation of evidence
Budowle B, Schutzer SE, Ascher MS, Atlas RM, Burans JP, Chakraborty R, Dunn JJ, Fraser CM, Franz DR, Leighton TJ, Morse SA, Murch RS, Ravel J, Rock DL, Slezak TR, Velsko SP, Walsh AC, Walters RA
PMID: 15870301
Plant physiology. 2005-05-01; 138.1: 38-46.
Databases and information integration for the Medicago truncatula genome and transcriptome
Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, Town CD, Young ND, Retzel EF
PMID: 15888676
Bioinformatics (Oxford, England). 2005-05-01; 21.9: 1782-8.
Efficient implementation of a generalized pair hidden Markov model for comparative gene finding
Majoros WH, Pertea M, Salzberg SL
PMID: 15691859
Plant physiology. 2005-05-01; 138.1: 18-26.
The institute for genomic research Osa1 rice genome annotation database
Yuan Q, Ouyang S, Wang A, Zhu W, Maiti R, Lin H, Hamilton J, Haas B, Sultana R, Cheung F, Wortman J, Buell CR
PMID: 15888674
Nature methods. 2005-05-01; 2.5: 345-50.
Multiple-laboratory comparison of microarray platforms
Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W
PMID: 15846361
Applied and environmental microbiology. 2005-05-01; 71.5: 2530-8.
DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens
Methé BA, Webster J, Nevin K, Butler J, Lovley DR
PMID: 15870343
Journal of bacteriology. 2005-05-01; 187.10: 3339-51.
Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans
Schmid AK, Howell HA, Battista JR, Peterson SN, Lidstrom ME
PMID: 15866918
Medical mycology. 2005-05-01; 43 Suppl 1.S313-9.
The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus
Ferreira ME, Colombo AL, Paulsen I, Ren Q, Wortman J, Huang J, Goldman MH, Goldman GH
PMID: 16110826
International journal of systematic and evolutionary microbiology. 2005-05-01; 55.Pt 3: 1021-6.
Genomic analysis of Hyphomonas neptunium contradicts 16S rRNA gene-based phylogenetic analysis: implications for the taxonomy of the orders 'Rhodobacterales' and Caulobacterales
Badger JH, Eisen JA, Ward NL
PMID: 15879228
Nature methods. 2005-05-01; 2.5: 351-6.
Standardizing global gene expression analysis between laboratories and across platforms
Bammler T, Beyer RP, Bhattacharya S, Boorman GA, Boyles A, Bradford BU, Bumgarner RE, Bushel PR, Chaturvedi K, Choi D, Cunningham ML, Deng S, Dressman HK, Fannin RD, Farin FM, Freedman JH, Fry RC, Harper A, Humble MC, Hurban P, Kavanagh TJ, Kaufmann WK, Kerr KF, Jing L, Lapidus JA, Lasarev MR, Li J, Li YJ, Lobenhofer EK, Lu X, Malek RL, Milton S, Nagalla SR, O'malley JP, Palmer VS, Pattee P, Paules RS, Perou CM, Phillips K, Qin LX, Qiu Y, Quigley SD, Rodland M, Rusyn I, Samson LD, Schwartz DA, Shi Y, Shin JL, Sieber SO, Slifer S, Speer MC, Spencer PS, Sproles DI, Swenberg JA, Suk WA, Sullivan RC, Tian R, Tennant RW, Todd SA, Tucker CJ, Van Houten B, Weis BK, Xuan S, Zarbl H, Members of the Toxicogenomics Research Consortium
PMID: 15846362

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