GCID Publications

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 2014-10-01; 27.156-62.
Whole-genome analyses reveals the animal origin of a rotavirus G4P[6] detected in a child with severe diarrhea
Martinez M, Galeano ME, Akopov A, Palacios R, Russomando G, Kirkness EF, Parra GI
PMID: 25075468
Journal of virology. 2014-09-01; 88.17: 10110-9.
Introductions and evolution of human-origin seasonal influenza a viruses in multinational swine populations
Nelson MI, Wentworth DE, Culhane MR, Vincent AL, Viboud C, LaPointe MP, Lin X, Holmes EC, Detmer SE
PMID: 24965467
Journal of virology. 2014-09-01; 88.17: 9842-63.
Analysis of human rotaviruses from a single location over an 18-year time span suggests that protein coadaption influences gene constellations
Zhang S, McDonald PW, Thompson TA, Dennis AF, Akopov A, Kirkness EF, Patton JT, McDonald SM
PMID: 24942570
Nature reviews. Genetics. 2014-09-01; 15.9: 577-84.
Recent advances in genomic DNA sequencing of microbial species from single cells
Lasken RS, McLean JS
PMID: 25091868
Journal of virology. 2014-08-01; 88.16: 9060-71.
Absence of genetic differences among G10P[11] rotaviruses associated with asymptomatic and symptomatic neonatal infections in Vellore, India
Libonati MH, Dennis AF, Ramani S, McDonald SM, Akopov A, Kirkness EF, Kang G, Patton JT
PMID: 24899175
Virology. 2014-08-01; 462-463.81-90.
The evolutionary dynamics of influenza A and B viruses in the tropical city of Managua, Nicaragua
Nelson MI, Balmaseda A, Kuan G, Saborio S, Lin X, Halpin RA, Stockwell TB, Wentworth DE, Harris E, Gordon A
PMID: 24959982
Antimicrobial agents and chemotherapy. 2014-08-01; 58.8: 4961-5.
Population structure of KPC-producing Klebsiella pneumoniae isolates from midwestern U.S. hospitals
Wright MS, Perez F, Brinkac L, Jacobs MR, Kaye K, Cober E, van Duin D, Marshall SH, Hujer AM, Rudin SD, Hujer KM, Bonomo RA, Adams MD
PMID: 24913165
BMC bioinformatics. 2014-07-03; 15.233.
BorreliaBase: a phylogeny-centered browser of Borrelia genomes
Di L, Pagan PE, Packer D, Martin CL, Akther S, Ramrattan G, Mongodin EF, Fraser CM, Schutzer SE, Luft BJ, Casjens SR, Qiu WG
PMID: 24994456
Emerging microbes & infections. 2014-07-01; 3.7: e47.
Characterization of a G1P[8] rotavirus causing an outbreak of gastroenteritis in the Northern Territory, Australia, in the vaccine era
Donato CM, Cowley D, Snelling TL, Akopov A, Kirkness EF, Kirkwood CD
PMID: 26038746
Influenza and other respiratory viruses. 2014-07-01; 8.4: 493-8.
Genomic analyses detect Eurasian-lineage H10 and additional H14 influenza A viruses recovered from waterfowl in the Central United States
Fries AC, Nolting JM, Bowman AS, Killian ML, Wentworth DE, Slemons RD
PMID: 24698181

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