Bioinformatics Training April 4 - May 8, 2017
Visiting scientist Dr. Naser A Feto from Vaal University of Technology, South Africa attended bioinformatics training at JCVI. JCVI instructors included Mr. Indresh Singh, Ms. Lauren Brinkac, Mr. Toby Clarke, Dr. Rembert Pieper. The visiting scientists were led through training and hands-on informatics exercises of following topics.
|
Training topics |
|---|
|
Python/Biopython |
|
Unix/Linux |
|
Sequencing and data QC |
|
Data submission (SRA, GenBank) |
|
Informatics for Assembly, SNP, RNA-sequence analysis |
|
Introduction to R-Programming |
|
Comparative and Phylogenetic analysis (Pangenome, NASP, LOCUST, etc) |
|
Tools for Pathway and Network Analysis of ‘OMICS Data |
|
Molecular docking & protein 3-d visualization tools |
|
Informatics for Proteomics |
|
Bioinformatics for cancer genomics |
|
Genome Wide Association Studies (GWAS) & SNPs |
|
Analyses of demo data involving different tools |
|
CLC Genomics Workbench |
