Publications

mSystems. 2019-05-21; 4.4:
Network Integrative Genomic and Transcriptomic Analysis of Carbapenem-Resistant Klebsiella pneumoniae Strains Identifies Genes for Antibiotic Resistance and Virulence
Lee M, Pinto NA, Kim CY, Yang S, D'Souza R, Yong D, Lee I
PMID: 31117026
JMIR mental health. 2019-05-08; 6.5: e12617.
Association Between Improvement in Baseline Mood and Long-Term Use of a Mindfulness and Meditation App: Observational Study
Athanas AJ, McCorrison JM, Smalley S, Price J, Grady J, Campistron J, Schork NJ
PMID: 31066704
JCI insight. 2019-05-02; 4.9:
Differential transcriptome and development of human peripheral plasma cell subsets
Garimilla S, Garimalla S, Nguyen DC, Halliley JL, Tipton C, Rosenberg AF, Fucile CF, Saney CL, Kyu S, Kaminski D, Qian Y, Scheuermann RH, Gibson G, Sanz I, Lee FE
PMID: 31045577
The New phytologist. 2019-05-01; 222.3: 1364-1379.
Cross-compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum
Broddrick JT, Du N, Smith SR, Tsuji Y, Jallet D, Ware MA, Peers G, Matsuda Y, Dupont CL, Mitchell BG, Palsson BO, Allen AE
PMID: 30636322
Proceedings of the National Academy of Sciences of the United States of America. 2019-04-30; 116.18: 8960-8965.
Functional characterization of 3D protein structures informed by human genetic diversity
Hicks M, Bartha I, di Iulio J, Venter JC, Telenti A
PMID: 30988206
Proceedings of the National Academy of Sciences of the United States of America. 2019-04-23; 116.17: 8499-8504.
Klebsiella and Providencia emerge as lone survivors following long-term starvation of oral microbiota
Baker JL, Hendrickson EL, Tang X, Lux R, He X, Edlund A, McLean JS, Shi W
PMID: 30975748
mBio. 2019-04-16; 10.2:
Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease
Aleti G, Baker JL, Tang X, Alvarez R, Dinis M, Tran NC, Melnik AV, Zhong C, Ernst M, Dorrestein PC, Edlund A
PMID: 30992349
BMC bioinformatics. 2019-04-15; 20.1: 185.
Highly efficient hypothesis testing methods for regression-type tests with correlated observations and heterogeneous variance structure
Zhang Y, Bandyopadhyay G, Topham DJ, Falsey AR, Qiu X
PMID: 30987598
Journal of proteome research. 2019-04-05; 18.4: 1907-1915.
Self-Assembled STrap for Global Proteomics and Salivary Biomarker Discovery
Lin YH, Eguez RV, Torralba MG, Singh H, Golusinski P, Goliusinski W, Golusinski W, Masternak M, Nelson KE, Freire M, Yu Y
PMID: 30848925
Frontiers in microbiology. 2019-04-03; 10.664.
Removal of a Subset of Non-essential Genes Fully Attenuates a Highly Virulent Mycoplasma Strain
Jores J, Ma L, Ssajjakambwe P, Schieck E, Liljander A, Chandran S, Stoffel MH, Cippa V, Arfi Y, Assad-Garcia N, Falquet L, Sirand-Pugnet P, Blanchard A, Lartigue C, Posthaus H, Labroussaa F, Vashee S
PMID: 31001234

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