HMM Summary Page: TIGR04393
| Accession | TIGR04393 |
| Name | rpt_T5SS_PEPC |
| Function | T5SS/PEP-CTERM-associated repeat |
| Trusted Cutoff | 23.00 |
| Domain Trusted Cutoff | 23.00 |
| Noise Cutoff | 20.00 |
| Domain Noise Cutoff | 20.00 |
| Isology Type | repeat |
| HMM Length | 49 |
| Author | Haft DH |
| Entry Date | Dec 7 2012 9:10AM |
| Last Modified | Dec 7 2012 9:10AM |
| Comment | This HMM describes a repeat about 50 amino acids in length, appearing sometimes more than ten times in tandem in a single protein. Most proteins with this repeat have a C-terminal autotransporter domain (TIGR01414, PF03797) and/or an N-terminal type V secretion system signal peptide (PF13018), while others instead have a C-terminal PEP-CTERM domain (TIGR02595). |