HMM Summary Page: TIGR04387
Accession | TIGR04387 |
Name | capsid_maj_N4 |
Function | major capsid protein, N4-gp56 family |
Trusted Cutoff | 60.00 |
Domain Trusted Cutoff | 50.00 |
Noise Cutoff | 30.00 |
Domain Noise Cutoff | 30.00 |
Isology Type | equivalog |
HMM Length | 324 |
Author | Haft DH |
Entry Date | Oct 19 2012 12:14PM |
Last Modified | Oct 19 2012 12:14PM |
Comment | Members of this family are phage major capsid proteins as found in phage N4 (a double-stranded DNA virus) plus many additional lytic phage and integrated prophage regions. |
References | RN [1] RM PMID:18374942 RT Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4. RA Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG RL J Mol Biol. 2008 May 2;378(3):726-36. |
Genome Property | GenProp0208: phage: major features (HMM) |