HMM Summary Page: TIGR04319
Accession | TIGR04319 |
Name | SerAla_Lrha_rpt |
Function | surface protein repeat Ser-Ala-175 |
Trusted Cutoff | 120.00 |
Domain Trusted Cutoff | 70.00 |
Noise Cutoff | 100.00 |
Domain Noise Cutoff | 50.00 |
Isology Type | repeat |
HMM Length | 175 |
Author | Haft DH |
Entry Date | Apr 30 2012 4:41PM |
Last Modified | Aug 12 2012 6:56PM |
Comment | This serine and alanine-rich surface protein repeat, about 175 amino acids long, occurs up to nine times in surface proteins of some Lactobacillus strains, particularly in Lactobacillus rhamnosus. Members proteins have the N-terminal variant signal sequence described by TIGR03715 and C-terminal LPXTG signals for surface attachment by sortase. |