HMM Summary Page: TIGR03941
| Accession | TIGR03941 |
| Name | tRNA_deam_assoc |
| Function | putative tRNA adenosine deaminase-associated protein |
| Trusted Cutoff | 53.60 |
| Domain Trusted Cutoff | 53.60 |
| Noise Cutoff | 42.20 |
| Domain Noise Cutoff | 42.20 |
| Isology Type | hypoth_equivalog |
| HMM Length | 156 |
| Author | Haft DH |
| Entry Date | Feb 18 2010 4:59PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM describes a protein family about 200 amino acids in length with only five invariant residues, including an Arg, a Ser-Asp pair, and two Gly residues. Members always are found exclusively in Actinobacteria, and always adjacent to homologs of TadA, a tRNA-specific adenosine deaminase from Escherichia coli. Homology, phyletic pattern, and gene neighborhood together suggest a housekeeping function in tRNA metabolism. |