HMM Summary Page: TIGR03488
Accession | TIGR03488 |
Name | cas_Cas5p |
Function | CRISPR-associated protein Cas5, subtype PGING |
Gene Symbol | cas5 |
Trusted Cutoff | 100.00 |
Domain Trusted Cutoff | 100.00 |
Noise Cutoff | 40.00 |
Domain Noise Cutoff | 40.00 |
Isology Type | equivalog |
HMM Length | 236 |
Author | Haft DH |
Entry Date | Oct 4 2007 1:48PM |
Last Modified | Jul 19 2012 12:22PM |
Comment | CC Members of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pgingi (Porphyromonas gingivalis) subtype, but shows some sequence similarity to genes of the Cas5 type (see TIGR02593). |
Genome Property | GenProp0768: CRISPR system, Pging subtype (HMM) |