| Accession | TIGR02898 |
| Name | spore_YhcN_YlaJ |
| Function | sporulation lipoprotein, YhcN/YlaJ family |
| Trusted Cutoff | 99.75 |
| Domain Trusted Cutoff | 99.75 |
| Noise Cutoff | 52.70 |
| Domain Noise Cutoff | 52.70 |
| Isology Type | subfamily |
| HMM Length | 158 |
| Mainrole Category | Cellular processes |
| Subrole Category | Sporulation and germination |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0030436: asexual sporulation biological_process |
| Author | Haft DH |
| Entry Date | Mar 17 2006 10:35AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment. |
| References | RN [1]
RM PMID: 9611260
RT Characterization of yhcN, a new forespore-specific gene of Bacillus subtilis.
RA Bagyan I, Noback M, Bron S, Paidhungat M, Setlow P
RL Gene. 1998 Jun 8;212(2):179-88.
RN [2]
RM PMID: 12480901
RT Proteomics characterization of novel spore proteins of Bacillus subtilis.
RA Kuwana R, Kasahara Y, Fujibayashi M, Takamatsu H, Ogasawara N, Watabe K
RL Microbiology. 2002 Dec;148(Pt 12):3971-82. |
| Genome Property | GenProp0610: endospore formation marker gene set (HMM) |
