HMM Summary Page: TIGR02742
Accession | TIGR02742 |
Name | TrbC_Ftype |
Function | type-F conjugative transfer system pilin assembly protein TrbC |
Gene Symbol | trbC |
Trusted Cutoff | 66.45 |
Domain Trusted Cutoff | 66.45 |
Noise Cutoff | 39.45 |
Domain Noise Cutoff | 39.45 |
Isology Type | equivalog |
HMM Length | 130 |
Author | Selengut J |
Entry Date | Dec 18 2005 11:12AM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This protein is an essential component of the F-type conjugative pilus assembly system for the transfer of plasmid DNA [1,2]. The N-terminal portion of these proteins are heterogeneous and are not covered by this model. |
References | RN [1] RM PMID: 205063 RA Maneewannakul S, Maneewannakul K, Ippen-Ihler K. RT Characterization of trbC, a new F plasmid tra operon gene that is essential to conjugative transfer. RL J Bacteriol. 1991 Jun;173(12):3872-8. RN [2] RM PMID: 16138100 RA Frost LS, Leplae R, Summers AO, Toussaint A. RT Mobile genetic elements: the agents of open source evolution. RL Nat Rev Microbiol. 2005 Sep;3(9):722-32. |
Genome Property | GenProp0484: F-type conjugation system (type IV secretion) specific components (HMM) |