Accession | TIGR02674 |
Name | cas_cyan_RAMP_2 |
Function | CRISPR-associated RAMP protein, Csx10 family |
Gene Symbol | csx10 |
Trusted Cutoff | 177.30 |
Domain Trusted Cutoff | 177.30 |
Noise Cutoff | 74.55 |
Domain Noise Cutoff | 74.55 |
Isology Type | hypoth_equivalog |
HMM Length | 402 |
Mainrole Category | Mobile and extrachromosomal element functions |
Subrole Category | Other |
Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| GO:0043571: maintenance of CRISPR repeat elements biological_process |
Author | Haft DH |
Entry Date | Oct 10 2005 5:32PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily ( PF03787). |
References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
DR PFAM; PF03787; CRISPR-associated RAMP protein
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
Genome Property | GenProp0021: CRISPR region (HMM) |