| Accession | TIGR02221 |
| Name | cas_TM1812 |
| Function | CRISPR-associated protein, TM1812 family |
| Trusted Cutoff | 76.25 |
| Domain Trusted Cutoff | 76.25 |
| Noise Cutoff | 65.30 |
| Domain Noise Cutoff | 65.30 |
| Isology Type | hypoth_equivalog |
| HMM Length | 218 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Jun 8 2004 9:02AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1812 of Thermotoga maritima, is found also in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, a large plasmid of Synechocystis sp. PCC 6803, and Fibrobacter succinogenes S85. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0021: CRISPR region (HMM) |
