HMM Summary Page: TIGR01646
| Accession | TIGR01646 |
| Name | vgr_GE |
| Function | Rhs element Vgr protein |
| Trusted Cutoff | 121.80 |
| Domain Trusted Cutoff | 121.80 |
| Noise Cutoff | 113.60 |
| Domain Noise Cutoff | 113.60 |
| Isology Type | subfamily |
| HMM Length | 480 |
| Author | Haft DH |
| Entry Date | Aug 27 2002 4:53PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents the Vgr family of proteins, associated with some classes of Rhs elements. This model does not include a large octapeptide repeat region, VGXXXXXX, found in the Vgr of Rhs classes G and E. |
| References | RM 9696756 RT Rhs elements comprise three subfamilies which diverged prior to acquisition by Escherichia coli. RA Wang YD, Zhao S, Hill CW. RL J Bacteriol 1998 Aug;180(16):4102-10 |