Accession | TIGR01603 |
Name | maj_tail_phi13 |
Function | phage major tail protein, phi13 family |
Trusted Cutoff | 35.20 |
Domain Trusted Cutoff | 35.20 |
Noise Cutoff | 34.95 |
Domain Noise Cutoff | 34.95 |
Isology Type | subfamily |
HMM Length | 190 |
Mainrole Category | Mobile and extrachromosomal element functions |
Subrole Category | Prophage functions |
Gene Ontology Term | GO:0005198: structural molecule activity molecular_function |
| GO:0019038: provirus cellular_component |
| GO:0019068: virion assembly biological_process |
Author | Haft DH, Fouts DE, Sunshine J |
Entry Date | Jul 25 2002 12:07PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM describes a set of proteins that share low levels of sequence similarity but similar lengths and similar patterns of charged, hydrophobic, and Gly/Pro residues. All members (except one attributed to mouse embryo cDNA) belong to phage of Gram-positive bacteria. Several are identified as phage major tail proteins. Some members of this family have additional C-terminal regions of about 100 residues not included in this model. |
Genome Property | GenProp0208: phage: major features (HMM) |