HMM Summary Page: TIGR01559
| Accession | TIGR01559 |
| Name | squal_synth |
| Function | farnesyl-diphosphate farnesyltransferase |
| Trusted Cutoff | 286.75 |
| Domain Trusted Cutoff | 286.75 |
| Noise Cutoff | 127.80 |
| Domain Noise Cutoff | 127.80 |
| Isology Type | equivalog |
| EC Number | 2.5.1.21 |
| HMM Length | 337 |
| Author | Haft DH |
| Entry Date | Jun 19 2002 12:09PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM describes farnesyl-diphosphate farnesyltransferase, also known as squalene synthase, as found in eukaryotes. This family is related to phytoene synthases. Tentatively identified archaeal homologs (excluded from this model) lack the C-terminal predicted transmembrane region universally conserved among members of this family. |
| References | DR EXPERIMENTAL; SP|P37268; Homo sapiens DR EXPERIMENTAL; SP|P53799; Arabidopsis thaliana DR EXPERIMENTAL; SP|P29704; Saccharomyces cerevisiae DR OUTGROUP; SP|P22872; Phytoene synthase |