| Accession | TIGR01551 |
| Name | major_capsid_P2 |
| Function | phage major capsid protein, P2 family |
| Trusted Cutoff | 219.65 |
| Domain Trusted Cutoff | 219.65 |
| Noise Cutoff | 126.45 |
| Domain Noise Cutoff | 126.45 |
| Isology Type | equivalog |
| HMM Length | 326 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Prophage functions |
| Gene Ontology Term | GO:0005198: structural molecule activity molecular_function |
| | GO:0019028: viral capsid cellular_component |
| | GO:0019069: viral capsid assembly biological_process |
| Author | Fouts DE, Haft DH |
| Entry Date | Jun 13 2002 4:33PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. |
| References | DR EXPERIMENTAL; SP|P25477; bacteriophage P2
RN [1]
RM 1837355
RT Nucleotide sequence of the DNA packaging and capsid synthesis genes of bacteriophage P2.
RA Linderoth NA, Ziermann R, Haggard-Ljungquist E, Christie GE, Calendar R.
RL Nucleic Acids Res 1991 Dec;19(25):7207-14 |
| Genome Property | GenProp0208: phage: major features (HMM) |
