HMM Summary Page: TIGR01195
Accession | TIGR01195 |
Name | oadG_fam |
Function | sodium pump decarboxylases, gamma subunit |
Trusted Cutoff | 36.05 |
Domain Trusted Cutoff | 36.05 |
Noise Cutoff | 32.80 |
Domain Noise Cutoff | 32.80 |
Isology Type | subfamily |
HMM Length | 84 |
Author | Haft DH |
Entry Date | Mar 4 2001 11:35PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This model finds the subfamily of distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit. Most sequences scoring between the noise and trusted cutoffs are eukaryotic sodium channel proteins. |
References | DR HAMAP; MF_00404; 18 of 18 |