| Accession | TIGR00632 |
| Name | vsr |
| Function | DNA mismatch endonuclease Vsr |
| Gene Symbol | vsr |
| Trusted Cutoff | 97.85 |
| Domain Trusted Cutoff | 97.85 |
| Noise Cutoff | 44.85 |
| Domain Noise Cutoff | 44.85 |
| Isology Type | subfamily |
| EC Number | 3.1.-.- |
| HMM Length | 119 |
| Mainrole Category | DNA metabolism |
| Subrole Category | DNA replication, recombination, and repair |
| Gene Ontology Term | GO:0004520: endodeoxyribonuclease activity molecular_function |
| | GO:0006298: mismatch repair biological_process |
| Author | Loftus BJ, Eisen JA, Haft DH |
| Entry Date | Oct 20 1999 11:57AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase. |
| References | DR SWISSPROT; P09184;
RN [1]
RM PMID:2198248
RT A gene required for very short patch repair in Escherichia coli is adjacent to the DNA cytosine methylase gene.
RA Sohail A, Lieb M, Dar M, Bhagwat AS
RL J Bacteriol. 1990 Aug;172(8):4214-21. |
| Genome Property | GenProp0767: very short patch repair (HMM) |
