Genome Property Definition Page
Accession | GenProp1101 | |
Name | quinoprotein cytochrome relay system | |
Type | SYSTEM | |
Description | This system features a putative carrier protein, TIGR04557, related to the SoxY and SoxZ carrier complex of the sulfate oxidation cycle, as well as PQQ-dependent enzymes that have a Cys-Cys motif, and specialized cytochromes involved in electron transport. Authentic SoxY (see TIGR04488) is a carrier protein for sulfur oxidation, with a covalent attachment site near its C-terminus, a Cys residue in the context GGCGG or GGCG. The carrier Cys of SoxY is conserved in TIGR04557, but what might be attached in the latter is unknown. Note that GenProp0895 (alcohol ABC transporter, PedABC-type) describes a four-gene operon closely tied to this system. | |
Parent Property | GenProp0070: energy metabolism | |
Literature References |
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Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
probable periplasmic binding protein | qu_ABCbn | NO | TIGR03871 (HMM): quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein | |
relay cytochrome | quin_Cyt | YES | TIGR03874 (HMM): c-type cytochrome, methanol metabolism-related TIGR04494 (HMM): cytochrome c-550 PedF | |
PQQ-dependent dehydrogenase, CysCys motif family | quin_PQQ | YES | TIGR03075 (HMM): PQQ-dependent dehydrogenase, methanol/ethanol family | |
SoxYZ-like carrier | quin_YZ | YES | TIGR04557 (HMM): quinoprotein dehydrogenase-associated SoxYZ-like carrier | |
quinoprotein relay system zinc metallohydrolase | quin_Zn | YES | TIGR04558 (HMM): quinoprotein relay system zinc metallohydrolase 1 TIGR04559 (HMM): quinoprotein relay system zinc metallohydrolase 2 |
Parent Properties
Accession | Name |
---|---|
GenProp0070 | energy metabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0011 | methanogenesis |
GenProp0023 | glyoxylate shunt |
GenProp0027 | photosynthesis |
GenProp0033 | TCA cycle |
GenProp0120 | pentose phosphate cycle |
GenProp0131 | electron transport |
GenProp0243 | ATP synthases |
GenProp0298 | fermentation |
GenProp0459 | D-xylose utilization (conversion to D-xylulose-5-phosphate) |
GenProp0468 | Entner-Doudoroff pathway |
GenProp0473 | arsenite oxidase |
GenProp0611 | aerobic respiration |
GenProp0636 | respiratory nitrate reductase |
GenProp0637 | anaerobic dimethyl sulfoxide reductase |
GenProp0638 | trimethylamine N-oxide reductase system |
GenProp0682 | formate-dependent nitrite reductase, seven-gene type |
GenProp0683 | cytochrome c nitrite reductase NrfHA |
GenProp0691 | glycolysis |
GenProp0695 | cytochrome b558/566 |
GenProp0723 | hydrogenase, nickel and F420-dependent |
GenProp0737 | anaerobic glycerol-3-phosphate dehydrogenase complex |
GenProp0755 | pyruvate conversion to propionate, anaerobic, FAD/NAD-regenerating |
GenProp0756 | fumarate reductase complex |
GenProp0764 | DMSO reductase family type II enzyme |
GenProp0841 | 2-oxoacid:ferredoxin oxidoreductase |
GenProp0856 | bacterio-opsin system |
GenProp0914 | hydrogenase, [FeFe]-dependent |
GenProp0915 | hydrogenase, mono-iron type |
GenProp1089 | B12-dependent trimeric diol/glycerol dehydratase |