Accession | GenProp0936 |
Name | bacteriocin system, sporulation delay protein group |
Type | SYSTEM |
Description | This Genome Property describes a three-gene system of antimicrobial peptide and two export proteins modeled on SdpC (sporulation delay protein C) from Bacillus subtilis, a killing peptide that allows cannibalism to obtain nutrients and avoid the irreversible sporulation cascade. Related systems are sparsely but widely distributed. Additional components of the SdpABC system itself, such as immunity protein SdpI and regulatory proteins, were not recognized as universal to such systems by phylogenetic profiling mechanisms and are not modeled within this Genome Property. |
JCVI Role | Toxin production and resistance |
Parent Property | GenProp0077: natural products biosynthesis
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Literature References | [ 1 ]Lopez D, Vlamakis H, Losick R, Kolter R Cannibalism enhances biofilm development in Bacillus subtilis. Mol Microbiol. 2009 Nov;74(3):609-18. Epub 2009 Sep 22. PMID 19775247 |
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Gene Ontology Term | GO:0030152: bacteriocin biosynthetic process (biological_process)
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Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
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antimicrobial peptide system protein, SdpA family | SdpA | YES | TIGR04034 (HMM): antimicrobial peptide system protein, SdpA family | GO:0030152: bacteriocin biosynthetic process
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antimicrobial peptide system protein, SdpB family | SdpB | YES | TIGR04033 (HMM): antimicrobial peptide system protein, SdpB family | GO:0030152: bacteriocin biosynthetic process
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antimicrobial peptide, SdpC family | SdpC | YES | TIGR04032 (HMM): antimicrobial peptide, SdpC family | GO:0030152: bacteriocin biosynthetic process
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Accession | Name |
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GenProp0014 | polyketide biosynthesis, type I |
GenProp0015 | polyketide biosynthesis, type II |
GenProp0040 | thiotemplate type non-ribosomal peptide biosynthesis |
GenProp0169 | hybrid NRPS-PKS natural pruduct biosynthesis genes |
GenProp0724 | phosphonoacetaldehyde biosynthesis from phosphoenolpyruvate |
GenProp0757 | quorum-sensing, autoinducer-2 system |
GenProp0758 | lycopene biosynthesis from IPP |
GenProp0770 | siderophore biosynthesis |
GenProp0807 | bacteriocin system, heterocycle biosynthesis group |
GenProp0808 | bacteriocin system, TIGR01847 leader group |
GenProp0809 | bacteriocin system, lactococcin 972 group |
GenProp0823 | violacein biosynthesis |
GenProp0825 | bacteriocin system, circular bacteriocin group |
GenProp0853 | lantibiotic system, gallidermin/epidermin family |
GenProp0861 | bacteriocin system, NHLP (nif11/nitrile hydratase leader peptide) transport group |
GenProp0901 | post-ribosomal natural product synthesis system, Burkholderia TOMM-type |
GenProp0919 | SCIFF/radical SAM Clostridial gene pair |
GenProp0920 | radical SAM Y_X(10)_GDL system |
GenProp0921 | radical SAM pair and His-Xaa-Ser repeats peptide |
GenProp0945 | radical SAM maturase bacteriocin system, CLI_3235 type |
GenProp0954 | radical SAM-cylized peptide, Pep1357C family |
GenProp0955 | modified peptide/radical SAM maturase system, YydFG family |
GenProp0956 | radical SAM maturase/selenobacteriocin system |
GenProp0962 | methanobactin biosynthesis, Mb-OB3b family |
GenProp0967 | radical SAM maturase system, CXXX repeats type |
GenProp0982 | radical SAM maturase system, FibroRumin system |
GenProp0984 | radical SAM maturase system, GG-Bacteroidales group |
GenProp0990 | cobaltopeptin biosynthesis |
GenProp0991 | ATP-grasp maturase system, microviridin/marinostatin class |
GenProp1000 | ATP-grasp maturase system, uncharacterized |
GenProp1002 | grasp-with-spasm peptide maturase system |
GenProp1003 | cysteine S-glycopeptide biosynthesis, sublancin family |
GenProp1029 | radical SAM/SPASM system SynChlorMet |
GenProp1037 | radical SAM/SPASM system GRRM |
GenProp1052 | geopeptide radical SAM/SPASM maturase system |
GenProp1062 | radical SAM/SPASM system Clo7bot |
GenProp1065 | radical SAM/SPASM TIGR04347/TIGR04031 system |
GenProp1078 | sporulation killing factor system |
GenProp1083 | cyanobactin-like ribosomal natural product biosynthesis |
GenProp1084 | enduracididine biosynthesis |
GenProp1090 | radical SAM/SPASM maturase system XYE |
GenProp1097 | bacimethrin biosynthesis |
GenProp1098 | 3-methylarginine biosynthesis |