Genome Property Definition Page
| Accession | GenProp0925 |
| Name | Leptospira core LPS elements |
| Type | METAPATH |
| Description | These components of Leptospira Lipopolysaccharide are shared among all analyzed Leptospira serovars. Currently, this includes only L. interrogans (Lai str. 56601, ntli02 and Copenageni str. Fiocruz, ntli03), borgpetersenii (Hardjo-Bovis L550, ntlb02 and JB1976m ntlb03), and biflexa Patoc 1 (Paris, ntlb05 and Ames, ntlb06). |
| Parent Property | GenProp0297: lipopolysaccharide biosynthesis |
Components
| Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
|---|---|---|---|---|
| Lipid A 4(prime) phosphatase | 4-Ppase | NO | ||
| NAD dependent epimerase/dehydratase, LLPSF_EDH_00002 family | EDH0002 | YES | 2777 (RULE_BASE) 2777 (RULE_BASE) | |
| UDP-GlcNAc3N biosynthesis from UDP-GlcNAc (GnnAB) | GlcNAc3N | YES | GenProp0924 (GENPROP): | |
| KDO2-Lipid A biosynthesis, basic elements | KDOLipA | YES | GenProp0204 (GENPROP): KDO(2)-lipid A (Re LPS) biosynthesis and delivery | |
| Lipid-A 1-methyltransferase (O-methylphosphate-forming) | LmtA | YES | 2800 (RULE_BASE) | |
| MarR-like transcriptional regulator, LLPSF_REG_00001 family | REG0001 | YES | TIGR04176 (HMM): EPS-associated transcriptional regulator, MarR family | |
| UDP-GlcNAc biosynthesis | UGlcNAc | YES | GenProp0750 (GENPROP): UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate |
Parent Properties
| Accession | Name |
|---|---|
| GenProp0297 | lipopolysaccharide biosynthesis |
Sibling Properties
| Accession | Name |
|---|---|
| GenProp0203 | LPS inner core biosynthesis, ketodeoxyoctonate and heptose type |
| GenProp0204 | KDO(2)-lipid A (Re LPS) biosynthesis and delivery |
| GenProp0929 | LPS outer core, E. coli type |
| GenProp0966 | E. coli O-antigen biosynthesis |
| GenProp0994 | Leptospira interrogans-specific LPS components |
| GenProp0995 | Leptospira interrogans LPS associated transketolase |