Genome Property Definition Page
Accession | GenProp0716 | |
Name | glucarate utilization via tartronate semi-aldehyde | |
Type | SYSTEM | |
Description | D-glucarate may be utilized by this pathway involving the lyase (aldolase) GarL which produces pyruvate and tartronate semi-aldehyde which may then be furter converted to 3-phosphoglycerate. GarD, the dehydratase and GarR, the reductase, may be present in the absence of GarL and where each is part of different processes. When this can be convincingly demonstrated, this property may be manually annotated as NO. | |
Parent Property | GenProp0142: catabolism | |
Literature References |
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Gene Ontology Term | GO:0019394: glucarate catabolic process (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
glycerate kinase (2.7.1.31) | GarK | NO | TIGR00045 (HMM-CLUST): glycerate kinase TIGR00045 (HMM): glycerate kinase | GO:0019394: glucarate catabolic process GO:0019394: glucarate catabolic process |
5-dehydro-4-deoxy-D-glucarate lyase (4.1.2.20) | GarL | YES | TIGR03239 (HMM): 2-dehydro-3-deoxyglucarate aldolase | GO:0019394: glucarate catabolic process |
tartronate semialdehyde reductase (1.1.1.60) | GarR | YES | TIGR01505 (HMM): 2-hydroxy-3-oxopropionate reductase | GO:0019394: glucarate catabolic process |
glucarate dehydratase (4.2.1.40) | GudD | YES | TIGR03247 (HMM): glucarate dehydratase | GO:0019394: glucarate catabolic process |
D-glucarate transporter, putative | transp | NO | TIGR00893 (HMM-CLUST): D-galactonate transporter | GO:0019394: glucarate catabolic process |
Parent Properties
Accession | Name |
---|---|
GenProp0142 | catabolism |
Sibling Properties
Accession | Name |
---|---|
GenProp0055 | polyhydroxyalkanoic acids |
GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
GenProp0156 | cyanophycin-like storage polymers |
GenProp0168 | glycogen system |
GenProp0210 | phenylacetic acid catabolism |
GenProp0231 | 4-hydroxyphenylacetate degradation |
GenProp0233 | GABA utilization |
GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
GenProp0239 | propionyl-CoA catabolism |
GenProp0241 | phosphonate catabolism |
GenProp0271 | trehalose utilization |
GenProp0272 | pyruvate fermentation to acetoin |
GenProp0273 | protocatechuate degradation to beta-ketoadipate |
GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
GenProp0294 | ethanolamine degradation proteinaceous organelle |
GenProp0457 | rhamnose catabolism |
GenProp0458 | fucose catabolism |
GenProp0461 | utilization of deoxynucleosides |
GenProp0653 | ectoine catabolism |
GenProp0674 | malonate decarboxylase |
GenProp0686 | allantoin catabolism to glyoxalate and urea |
GenProp0687 | allantoin catabolism to oxamate and carbamoyl-phosphate |
GenProp0688 | urate catabolism to allantoin |
GenProp0691 | glycolysis |
GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
GenProp0700 | purine catabolism via urate, xanthine and allantoin |
GenProp0702 | benzoyl-CoA reductase |
GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
GenProp0708 | catechol meta-cleavage pathway |
GenProp0709 | benzoate catabolism BoxABC pathway |
GenProp0711 | catechol ortho-cleavage upper pathway |
GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
GenProp0718 | oxalate degradation |
GenProp0734 | amino acid catabolism |
GenProp0749 | choline sulfate utilization |
GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
GenProp0763 | nicotinate fermentation to pyruvate and propionate |
GenProp0810 | encapsulin proteinaceous organelle |
GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
GenProp0902 | quinohemoprotein amine dehydrogenase |
GenProp1071 | myo-inositol catabolism |
GenProp1072 | cyanase system |
GenProp1076 | choline TMA-lyase system |