Genome Property Definition Page
Accession | GenProp0484 | |
Name | F-type conjugation system (type IV secretion) specific components | |
Type | SYSTEM | |
Description | A system for the transfer of plasmid DNA between cells via a pilus. This system is a specialized type-IV secretion system. | |
JCVI Role | Plasmid functions | |
Parent Property | GenProp0489: F-type conjugation system | |
Literature References |
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Gene Ontology Term | GO:0009291: unidirectional conjugation (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
TraF pilus assembly protein | TraF | YES | TIGR02739 (HMM): type-F conjugative transfer system pilin assembly protein TraF | GO:0009291: unidirectional conjugation |
Possible alternate TraF or TrbB | TraF-lik | NO | TIGR02740 (HMM): TraF-like protein | GO:0009291: unidirectional conjugation |
TraH pilus assembly protein | TraH | YES | PF06122 (HMM): conjugative relaxosome accessory transposon protein | GO:0009291: unidirectional conjugation |
TraI plasmid relaxase/helicase protein | TraI | YES | TIGR02760 (HMM): conjugative transfer relaxase protein TraI | GO:0009291: unidirectional conjugation |
TraN outer membrane mating-pair stabilization protein | TraN | YES | PF06986 (HMM): mating pair stabilisation protein TraN TIGR02750 (HMM): type-F conjugative transfer system mating-pair stabilization protein TraN | GO:0009291: unidirectional conjugation GO:0009291: unidirectional conjugation |
TraQ pilin inner membrane chaperone | TraQ | NO | TIGR02741 (HMM): type-F conjugative transfer system pilin chaperone TraQ | GO:0009291: unidirectional conjugation |
TraU mating-pair stabilization protein | TraU | YES | PF06834 (HMM): TraU protein | GO:0009291: unidirectional conjugation |
TraW pilus assembly protein | TraW | YES | TIGR02743 (HMM): type-F conjugative transfer system protein TraW | GO:0009291: unidirectional conjugation |
TraX pilin acetylase | TraX | NO | TIGR02755 (HMM): type-F conjugative transfer system pilin acetylase TraX | GO:0009291: unidirectional conjugation |
TrbB pilus assembly disulfide isomerase | TrbB | YES | TIGR02738 (HMM): type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | GO:0009291: unidirectional conjugation |
possible alternate TrbB, CXXC-containing protein | TrbB-lik | NO | CLUST+CXXCmotif (MANUAL) | |
TrbC pilus assembly protein | TrbC | YES | TIGR02742 (HMM): type-F conjugative transfer system pilin assembly protein TrbC | GO:0009291: unidirectional conjugation |
TrbI pilus assembly protein | TrbI | NO | TIGR02744 (HMM): type-F conjugative transfer system protein TrbI | GO:0009291: unidirectional conjugation |
Parent Properties
Accession | Name |
---|---|
GenProp0489 | F-type conjugation system |
Sibling Properties
Accession | Name |
---|---|
GenProp0485 | F and P-type conjugation systems (type IV secretion), common components |